Publications PIPLOM: prediction of exogenous peptide loading on major histocompatibility complex class I molecules Schmidt et al.Bioinform Adv. 2025 Mar 3, 2025 In-depth analysis of human virus-specific CD8+ T cells delineates unique phenotypic signatures for T cell specificity prediction Schmidt et al.Cell Reports 2023 Oct 19, 2023 Single-cell analysis reveals clonally expanded tumor-associated CD57+ CD8 T cells are enriched in the periphery of patients with metastatic urothelial cancer responding to PD-L1 blockade Fehlings, Kim et al. JITC 2022 Aug 18, 2022 NY-ESO-1-specific redirected T cells with endogenous TCR knockdown mediate tumor response and cytokine release syndrome. Ishihara et al.JITC 2022 Jun 29, 2022 Minimal Crossover between Mutations Associated with Omicron Variant of SARS-CoV-2 and CD8+ T-Cell Epitopes Identified in COVID-19 Convalescent Individuals Redd et al.MBIO 2022 Mar 1, 2022 Reproducible, scalable, and shareable analysis pipelines with bioinformatics workflow managers Laura et al.NATURE METHODS 2021 Sep 23, 2021 1 2 3 … 6
PIPLOM: prediction of exogenous peptide loading on major histocompatibility complex class I molecules Schmidt et al.Bioinform Adv. 2025 Mar 3, 2025
In-depth analysis of human virus-specific CD8+ T cells delineates unique phenotypic signatures for T cell specificity prediction Schmidt et al.Cell Reports 2023 Oct 19, 2023
Single-cell analysis reveals clonally expanded tumor-associated CD57+ CD8 T cells are enriched in the periphery of patients with metastatic urothelial cancer responding to PD-L1 blockade Fehlings, Kim et al. JITC 2022 Aug 18, 2022
NY-ESO-1-specific redirected T cells with endogenous TCR knockdown mediate tumor response and cytokine release syndrome. Ishihara et al.JITC 2022 Jun 29, 2022
Minimal Crossover between Mutations Associated with Omicron Variant of SARS-CoV-2 and CD8+ T-Cell Epitopes Identified in COVID-19 Convalescent Individuals Redd et al.MBIO 2022 Mar 1, 2022
Reproducible, scalable, and shareable analysis pipelines with bioinformatics workflow managers Laura et al.NATURE METHODS 2021 Sep 23, 2021